1PZ7

Modulation of agrin function by alternative splicing and Ca2+ binding

Structural Biology Knowledgebase: 1PZ7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.42 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.220

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1PZ7

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 44771.06

Macromolecule Entities
Molecule Chains Length Organism Details
Agrin A, B 204 Gallus gallus Fragment: BASAL LAMINA DOMAIN
Gene Name(s): AGRN Gene View AGRIN
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.42 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.220
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 101.33 α = 90.00
b = 57.54 β = 127.10
c = 74.62 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-10
  • Released Date: 2004-04-13
  • Deposition author(s): Stetefeld, J., Alexandrescu, A.T., Maciejewski, M.W., Jenny, M., Rathgeb-Szabo, K., Schulthess, T., Landwehr, R., Frank, S., Ruegg, M.A., Kammerer, R.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4