1PZ3

Crystal structure of a family 51 (GH51) alpha-L-arabinofuranosidase from Geobacillus stearothermophilus T6

Structural Biology Knowledgebase: 1PZ3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 1PZ3

Classification: HYDROLASE

Total Structure Weight: 114755.32

Macromolecule Entities
Molecule Chains Length Organism Details
Alpha-L-arabinofuranosidase A, B 502 Geobacillus stearothermophilus EC#: 3.2.1.55 IUBMB
Gene Name(s): abfA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.171
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 179.43 α = 90.00
b = 179.43 β = 90.00
c = 100.23 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-09
  • Released Date: 2003-10-07
  • Deposition author(s): Hoevel, K., Shallom, D., Niefind, K., Belakhov, V., Shoham, G., Baasov, T., Shoham, Y., Schomburg, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update