1PY9

The crystal structure of an autoantigen in multiple sclerosis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1PY9

Classification: IMMUNE SYSTEM

Total Structure Weight: 13469.95

Macromolecule Entities
Molecule Chains Length Organism Details
Myelin-oligodendrocyte glycoprotein A 116 Mus musculus Fragment: extracellular domain
Gene Name(s): Mog
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.201
  • Space Group: I 41

Unit Cell:

Length (Å) Angle (°)
a = 65.72 α = 90.00
b = 65.72 β = 90.00
c = 67.58 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-08
  • Released Date: 2003-09-30
  • Deposition author(s): Clements, C.S., Reid, H.H., Beddoe, T., Tynan, F.E., Perugini, M.A., Johns, T.G., Bernard, C.C., Rossjohn, J.

Revision History

  • Version 1_0: 2003-09-30

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description