1PY0

Crystal structure of E51C/E54C Psaz from A.faecalis with CLaNP probe


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 1PY0

Classification: ELECTRON TRANSPORT

Total Structure Weight: 14251.72

Macromolecule Entities
Molecule Chains Length Organism Details
Pseudoazurin A 125 Alcaligenes faecalis Mutation: E51C, E54C
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
YMA
Query on YMA

A 7,10,13-TRI(CARBOXYMETHYL)-5,15-DIOXO-4,7,10,13,16- PENTAAZA-1,19-DITHIANONADECANE
C18 H33 N5 O8 S2
MRDWXQKAAKNXSP-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Y1
Query on Y1

A YTTRIUM ION
Y
KAJPZYFHSCFBCI-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.193
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 42.70 α = 90.00
b = 42.70 β = 90.00
c = 116.90 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-07-07
  • Released Date: 2004-12-07
  • Deposition author(s): Prudencio, M., Rohovec, J., Peters, J.A., Tocheva, E., Boulanger, M.J., Murphy, M.E., Hupkes, H.J., Kosters, W., Impagliazzo, A., Ubbink, M.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance