1PVS

3-methyladenine Glcosylase II(AlkA) Hypoxanthine complex

Structural Biology Knowledgebase: 1PVS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.232

Literature

Macromolecules
Sequence Display for 1PVS

Classification: HYDROLASE

Total Structure Weight: 63123.14

Macromolecule Entities
Molecule Chains Length Organism Details
DNA-3-methyladenine glycosylase II A, B 282 Escherichia coli EC#: 3.2.2.21 IUBMB
Gene Name(s): alkA aidA b2068 JW2053
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
7HP
Query on 7HP

A, B 7-HYDROXY-PYRAZOLO[4,3-D]PYRIMIDINE
C5 H4 N4 O
JFZSDNLQDTYVEE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.232
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 58.01 α = 90.00
b = 75.98 β = 110.03
c = 61.42 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-28
  • Released Date: 2004-06-08
  • Deposition author(s): Teale, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4