1PT5

Crystal structure of gene yfdW of E. coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.176
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 1PT5

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 98444.73

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical protein yfdW A, B 437 Escherichia coli Shigella flexneri EC#: 2.8.3.16 IUBMB
Gene Name(s): frc yfdW b2374 JW2371
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACO
Query on ACO

A, B ACETYL COENZYME *A
C23 H38 N7 O17 P3 S
ZSLZBFCDCINBPY-ZSJPKINUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.176
  • R-Value Work: 0.158
  • Space Group: P 62

Unit Cell:

Length (Å) Angle (°)
a = 146.88 α = 90.00
b = 146.88 β = 90.00
c = 129.51 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-23
  • Released Date: 2003-09-09
  • Deposition author(s): Gruez, A., Roig-Zamboni, V., Valencia, C., Campanacci, V., Cambillau, C.

Revision History

  • Version 1_0: 2003-09-09

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance