1PM7

RmlC (dTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE)STRUCTURE FROM MYCOBACTERIUM TUBERCULOSIS AND INHIBITOR DESIGN. THE APO STRUCTURE.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1PM7

Classification: ISOMERASE

Total Structure Weight: 44976.18

Macromolecule Entities
Molecule Chains Length Organism Details
RFBC A, B 202 Mycobacterium tuberculosis EC#: 5.1.3.13 IUBMB
Gene Name(s): rmlC strM Rv3465
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A, B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.207
  • Space Group: P 32

Unit Cell:

Length (Å) Angle (°)
a = 66.07 α = 90.00
b = 66.07 β = 90.00
c = 87.62 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-10
  • Released Date: 2003-12-09
  • Deposition author(s): Dong, C., Naismith, J.H., TB Structural Genomics Consortium (TBSGC)

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Non-polymer description, Version format compliance