1PJG

RNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTG

Structural Biology Knowledgebase: 1PJG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.163
  • R-Value Work: 0.132

Literature

Macromolecules
Sequence Display for 1PJG

Classification: DNA-RNA HYBRID

Total Structure Weight: 6407.41

Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' A 10 synthetic
5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3' B 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.163
  • R-Value Work: 0.132
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 25.70 α = 90.00
b = 41.07 β = 90.00
c = 46.12 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-06-02
  • Released Date: 2003-12-09
  • Deposition author(s): Kopka, M.L., Lavelle, L., Han, G.W., Ng, H.-L., Dickerson, R.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4