1PJ1

RIBONUCLEOTIDE REDUCTASE R2-D84E/W48F SOAKED WITH FERROUS IONS AT PH 5

Structural Biology Knowledgebase: 1PJ1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1PJ1

Classification: OXIDOREDUCTASE

Total Structure Weight: 90008.79

Macromolecule Entities
Molecule Chains Length Organism Details
Ribonucleoside-diphosphate reductase 1 beta chain A, B 375 Escherichia coli EC#: 1.17.4.1 IUBMB
Mutation: W48F, D84E, Q326N
Gene Name(s): nrdB ftsB b2235 JW2229
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HG
Query on HG

A, B MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE
Query on FE

A, B FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.192
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 74.10 α = 90.00
b = 84.20 β = 90.00
c = 114.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-30
  • Released Date: 2004-01-13
  • Deposition author(s): Voegtli, W.C., Sommerhalter, M., Saleh, L., Baldwin, J., Bollinger Jr., J.M., Rosenzweig, A.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4