1PIV

BINDING OF THE ANTIVIRAL DRUG WIN51711 TO THE SABIN STRAIN OF TYPE 3 POLIOVIRUS: STRUCTURAL COMPARISON WITH DRUG BINDING IN RHINOVIRUS 14

Structural Biology Knowledgebase: 1PIV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.316

Literature

Macromolecules
Sequence Display for 1PIV

Classification: Virus [ VIPERdb ]

Total Structure Weight: 1476746.63

Macromolecule Entities
Molecule Chains Length Organism Details
POLIOVIRUS TYPE 3 (SUBUNIT VP1) 0 4 Enterovirus c Details: THIS ENTITY REPRESENTS A FEATURE IN THE ELECTRON DENSITY MAP WHICH APPEARS TO BE A BETA STRAND. ALTHOUGH THE SIDE CHAINS OF THIS STRAND CANNOT BE CORRELATED RELIABLY WITH THE SEQUENCE OF THE PROTEIN, THE FEATURE IS BELIEVED LIKELY TO CORRESPOND TO SOME PORTION OF THE AMINO TERMINAL EXTENSION OF VP1.
POLIOVIRUS TYPE 3 (SUBUNIT VP1) 1 301 Enterovirus c Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
POLIOVIRUS TYPE 3 (SUBUNIT VP2) 2 271 Enterovirus c Gene Name(s):
POLIOVIRUS TYPE 3 (SUBUNIT VP3) 3 238 Enterovirus c Gene Name(s):
POLIOVIRUS TYPE 3 (SUBUNIT VP4) 4 68 Enterovirus c Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
W71
Query on W71

1 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)- 3-METHYL ISOXAZOLE
COMPOUND IV (Synonym)
C20 H26 N2 O3
FKLJPTJMIBLJAV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MYR
Query on MYR

4 MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.316
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 321.06 α = 90.00
b = 358.62 β = 90.00
c = 381.82 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-02-02
  • Released Date: 1995-06-03
  • Deposition author(s): Hiremath, C.N., Grant, R.A., Filman, D.J., Hogle, J.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4