1PGJ

X-RAY STRUCTURE OF 6-PHOSPHOGLUCONATE DEHYDROGENASE FROM THE PROTOZOAN PARASITE T. BRUCEI

Structural Biology Knowledgebase: 1PGJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.82 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 1PGJ

Classification: OXIDOREDUCTASE

Total Structure Weight: 104568.33

Macromolecule Entities
Molecule Chains Length Organism Details
6-PHOSPHOGLUCONATE DEHYDROGENASE A, B 478 Trypanosoma brucei EC#: 1.1.1.44 IUBMB
Gene Name(s): GND
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.82 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.186
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 135.13 α = 90.00
b = 135.13 β = 90.00
c = 116.74 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-03-16
  • Released Date: 1998-11-11
  • Deposition author(s): Dohnalek, J., Phillips, C., Gover, S., Barrett, M.P., Adams, M.J.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4