1PF5

Structural Genomics, Protein YJGH

Structural Biology Knowledgebase: 1PF5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1PF5

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 14803.92

Macromolecule Entities
Molecule Chains Length Organism Details
Hypothetical protein yjgH A 131 Escherichia coli Gene Name(s): yjgH b4248 JW4206
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HG
Query on HG

A MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.196
  • Space Group: I 21 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 127.74 α = 90.00
b = 127.74 β = 90.00
c = 127.74 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-23
  • Released Date: 2003-12-09
  • Deposition author(s): Zhang, R., Joachimiak, A., Edwards, A., Savchenko, A., Xu, L., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values