1PBK

HOMOLOGOUS DOMAIN OF HUMAN FKBP25

Structural Biology Knowledgebase: 1PBK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 1PBK

Classification: ISOMERASE

Total Structure Weight: 13874.28

Macromolecule Entities
Molecule Chains Length Organism Details
FKBP25 A 116 Homo sapiens EC#: 5.2.1.8 IUBMB
Fragment: FKBP12 HOMOLOGOUS DOMAIN, RESIDUES PRO 109 - ASP 2
Gene Name(s): FKBP3 Gene View FKBP25
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RAP
Query on RAP

A RAPAMYCIN IMMUNOSUPPRESSANT DRUG
C51 H79 N O13
QFJCIRLUMZQUOT-HPLJOQBZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RAP N/A in BindingDB
Ki: 0.9 nM  BindingMOAD
Ki: 0.9 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.185
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 86.00 α = 90.00
b = 86.00 β = 90.00
c = 55.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-09-01
  • Released Date: 1996-10-14
  • Deposition author(s): Liang, J., Hung, D.T., Schreiber, S.L., Clardy, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4