1P8T

Crystal structure of Nogo-66 Receptor

Structural Biology Knowledgebase: 1P8T SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.265

Literature

Macromolecules
Sequence Display for 1P8T

Classification: SIGNALING PROTEIN

Total Structure Weight: 32058.04

Macromolecule Entities
Molecule Chains Length Organism Details
Reticulon 4 receptor A 285 Homo sapiens Gene Name(s): RTN4R Gene View NOGOR UNQ330/PRO526
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

A 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.265
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 123.96 α = 90.00
b = 123.96 β = 90.00
c = 120.17 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-07
  • Released Date: 2003-05-20
  • Deposition author(s): Barton, W.A., Liu, B.P., Tzvetkova, D., Jeffrey, P.D., Fournier, A.E., Sah, D., Cate, R., Strittmatter, S.M., Nikolov, D.B.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update