1OQ2

NMR structure of hemimethylated GATC site

Structural Biology Knowledgebase: 1OQ2 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 17
  • Selection Criteria: Structures with Acceptable Covalent Geometry Structures with the Least Restraint Violations Structures with the Lowest Energy

Literature

Macromolecules
Sequence Display for 1OQ2

Classification: DNA

Total Structure Weight: 7340.87

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*CP*GP*AP*GP*AP*TP*CP*TP*GP*CP*G)-3' A 12 synthetic
5'-D(*CP*GP*CP*AP*GP*(6MA)P*TP*CP*TP*CP*GP*C)-3' B 12 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
6MA
Query on 6MA
B DNA LINKING C11 H16 N5 O6 P A

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 17
  • Selection Criteria: structures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-03-07
  • Released Date: 2004-04-27
  • Deposition author(s): Bae, S.-H., Cheong, H.-K., Kang, S., Hwang, D.S., Cheong, C., Choi, B.-S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4