1OPO

THE STRUCTURE OF CARNATION MOTTLE VIRUS

Structural Biology Knowledgebase: 1OPO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Observed: 0.183

Literature

Macromolecules
Sequence Display for 1OPO

Classification: Virus [ VIPERdb ]

Total Structure Weight: 569099.63

Macromolecule Entities
Molecule Chains Length Organism Details
Coat protein A, B, C 348 Carnation mottle virus Gene Name(s): ORF4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Observed: 0.183
  • Space Group: I 2 3

Unit Cell:

Length (Å) Angle (°)
a = 382.60 α = 90.00
b = 382.60 β = 90.00
c = 382.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-03-06
  • Released Date: 2003-04-01
  • Deposition author(s): Morgunova, E., Dauter, Z., Fry, E., Stuart, D., Stel'mashchuk, V., Mikhailov, A.M., Wilson, K.S., Vainshtein, B.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4