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HIV-1 PROTEASE COMPLEXED WITH AN INHIBITOR LP-130
1ODY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Aspartic Protease
    Structure Weight: 22202.39
    Molecule: HIV-1 PROTEASE
    Polymer: 1 Type: protein Length: 99
    Chains: A, B
    EC#: 3.4.23.16   
    Organism: HIV-1 M:B_HXB2R
    Gene Name: gag-pol
    UniProtKB: Protein Feature View | Search PDB | P04585  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Hiv-1 m:b_hxb2r   Taxonomy   Expression System: Escherichia coli  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    LP1
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    LP1 C45 H58 N6 O7
    4-[2-(2-ACETYLAMINO-3-NAPHTALEN-1-YL-PROPIONYLAMINO)- 4-METHYL-PENTANOYLAMINO]-3-HYDROXY-6-METHYL- HEPTANOIC ACID [1-(1-CARBAMOYL-2-NAPHTHALEN- 1-YL-ETHYLCARBAMOYL)-PROPYL]-AMIDE
    LP1:1ODY
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    LP1
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    LP1
    N/Ain BindingDB
    Ki: 8 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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