1ODS

CEPHALOSPORIN C DEACETYLASE FROM BACILLUS SUBTILIS

Structural Biology Knowledgebase: 1ODS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.186
  • R-Value Work: 0.152

Literature

Macromolecules
Sequence Display for 1ODS

Classification: HYDROLASE

Total Structure Weight: 287507.53

Macromolecule Entities
Molecule Chains Length Organism Details
CEPHALOSPORIN C DEACETYLASE A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 318 Bacillus subtilis EC#: 3.1.1.41 IUBMB
Mutation: Q220E, D255Y
Gene Name(s): cah BSU03180
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B, C, D, E, F, G, H CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.186
  • R-Value Work: 0.152
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 315.21 α = 90.00
b = 315.21 β = 90.00
c = 68.48 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-02-20
  • Released Date: 2003-07-10
  • Deposition author(s): Vincent, F., Charnock, S.J., Verschueren, K.H.G., Turkenburg, J.P., Scott, D.J., Offen, W.A., Roberts, S., Pell, G., Gilbert, H.J., Brannigan, J.A., Davies, G.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4