1O6E

EPSTEIN-BARR VIRUS PROTEASE

Structural Biology Knowledgebase: 1O6E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1O6E

Classification: HYDROLASE

Total Structure Weight: 51128.53

Macromolecule Entities
Molecule Chains Length Organism Details
CAPSID PROTEIN P40 A, B 235 Human gammaherpesvirus 4 EC#: 3.4.21.97 IUBMB
Fragment: COAT PROTEIN VP24 (PROTEASE) DOMAIN, RESIDUES 1-235
Mutation: R64S
Gene Name(s): BVRF2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ISP
Query on ISP

A, B PHOSPHORYLISOPROPANE
C3 H9 O4 P
QPPQHRDVPBTVEV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.197
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 52.80 α = 90.00
b = 52.80 β = 90.00
c = 330.50 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-13
  • Released Date: 2002-11-14
  • Deposition author(s): Buisson, M., Hernandez, J., Lascoux, D., Schoehn, G., Forest, E., Arlaud, G., Seigneurin, J., Ruigrok, R.W.H., Burmeister, W.P.

Revision History

  • 2011-08-17
    Type: Function and keywords | Details: KEYWDS
  • 2011-08-17
    Type: Other | Details: HEADER,REMARK 280
  • 2011-08-17
    Type: Non-polymer description | Details: FORMUL
  • 2011-08-17
    Type: Geometry validation | Details: REMARK 500
  • 2011-08-17
    Type: Refinement description | Details: REMARK 3
  • 2011-08-17
    Type: Atom nomenclature | Details: HETATM
  • 2011-08-17
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-08-17
    Type: Version format compliance | Details: REMARK 4