1O46

CRYSTAL STRUCTURE OF SH2 IN COMPLEX WITH RU90395.

Structural Biology Knowledgebase: 1O46 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed: 0.192

Literature

Macromolecules
Sequence Display for 1O46

Classification: SIGNALING PROTEIN

Total Structure Weight: 13036.75

Macromolecule Entities
Molecule Chains Length Organism Details
PROTO-ONCOGENE TYROSINE-PROTEIN KINASE SRC A 108 Homo sapiens EC#: 2.7.10.2 IUBMB
Fragment: SH2 DOMAIN
Gene Name(s): SRC Gene View SRC1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
903
Query on 903

A 2-{4-[2-ACETYLAMINO-2-(1-BIPHENYL-4-YLMETHYL- 2-OXO-AZEPAN-3-YLCARBAMOYL)-ETHYL]-2-METHOXYCARBONYL- PHENYL}-2-FLUORO-MALONIC ACID
RU90395 (Synonym)
C35 H36 F N3 O9
RLLAUERCSKPFGD-VMPREFPWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
903 IC50: 10 nM (100) BindingDB

IC50: 10 nM  BindingMOAD
IC50: 10 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed: 0.192
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 26.59 α = 90.00
b = 58.55 β = 90.00
c = 64.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-15
  • Released Date: 2004-02-17
  • Deposition author(s): Lange, G., Loenze, P., Liesum, A.

Revision History

  • 2014-12-10
    Type: Source and taxonomy | Details: update taxonomy information
  • 2014-12-10
    Type: Other | Details: fix space group error
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4