NMR Ensemble

1O15

THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGS

Structural Biology Knowledgebase: 1O15 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 250
  • Conformers Submitted: 1
  • Selection Criteria: Restrained Regularized Mean Structure

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1O15

Classification: RNA

Total Structure Weight: 10818.64

Macromolecule Entities
Molecule Chains Length Organism Details
THEOPHYLLINE-BINDING RNA A 33 synthetic CONSENSUS SEQUENCE OF THE THEOPHYLLINE BINDING RNA APTAMER FLANKED BY A FOUR BASE-PAIR STEM, A THREE BASE-PAIR STEM, AND CAPPED BY A GAAA TETRALOOP

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TEP
Query on TEP

A THEOPHYLLINE
C7 H8 N4 O2
ZFXYFBGIUFBOJW-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 250
  • Conformers Submitted: 1
  • Selection Criteria: RESTRAINED REGULARIZED MEAN STRUCTURE

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2002-10-21
  • Released Date: 2003-02-18
  • Deposition author(s): Clore, G.M., Kuszewski, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4