1NVP

HUMAN TFIIA/TBP/DNA COMPLEX

Structural Biology Knowledgebase: 1NVP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 1NVP

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 58370.99


Macromolecule Entities
Molecule Chains Length Organism Details
TATA box binding protein A 181 Homo sapiens Fragment: C-TERMINAL 181 AMINO ACIDS
Gene Name(s): TBP Gene View GTF2D1 TF2D TFIID
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Transcription initiation factor IIA alpha chain B 57 Homo sapiens Fragment: N-terminal 58 amino acids
Gene Name(s): GTF2A1 Gene View TF2A1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Transcription initiation factor IIA beta chain C 76 Homo sapiens Fragment: c-terminal 76 amino acids
Gene Name(s): GTF2A1 Gene View TF2A1
Transcription initiation factor IIA gamma chain D 108 Homo sapiens Gene Name(s): GTF2A2 Gene View TF2A2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*GP*GP*GP*GP*GP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*G)-3' E 17 synthetic
5'-D(*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*CP*CP*CP*CP*CP*C)-3' F 17 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.229
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.62 α = 90.00
b = 90.88 β = 90.00
c = 125.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-02-04
  • Released Date: 2003-10-21
  • Deposition author(s): Bleichenbacher, M., Tan, S., Richmond, T.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4