1NTD

STRUCTURE OF ALCALIGENES FAECALIS NITRITE REDUCTASE MUTANT M150E THAT CONTAINS ZINC

Structural Biology Knowledgebase: 1NTD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 1NTD

Classification: OXIDOREDUCTASE (NITRIC OXIDE(A))

Total Structure Weight: 37189.27

Macromolecule Entities
Molecule Chains Length Organism Details
NITRITE REDUCTASE A 343 Alcaligenes faecalis EC#: 1.7.2.1 IUBMB
Mutation: M150E
Gene Name(s): nirK nir
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CU
Query on CU

A COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.172
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 127.76 α = 90.00
b = 127.76 β = 90.00
c = 67.02 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-07-03
  • Released Date: 1996-11-08
  • Deposition author(s): Murphy, M.E.P., Adman, E.T., Turley, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values