1NRK

YGFZ PROTEIN

Structural Biology Knowledgebase: 1NRK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 1NRK

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 36947.63

Macromolecule Entities
Molecule Chains Length Organism Details
YGFZ Protein A 328 Escherichia coli Mutation: M1M, M22M, M41M, M52M, M69M, M172M, M234M, M269M, M296M, M300M
Gene Name(s): ygfZ yzzW b2898 JW2866
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.193
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 151.00 α = 90.00
b = 151.00 β = 90.00
c = 68.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-24
  • Released Date: 2004-03-09
  • Deposition author(s): Teplyakov, A., Obmolova, G., Gilliland, G.L., Structure 2 Function Project (S2F)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4