1NOX

NADH OXIDASE FROM THERMUS THERMOPHILUS

Structural Biology Knowledgebase: 1NOX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.59 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.182

Literature

Macromolecules
Sequence Display for 1NOX

Classification: FLAVOENZYME

Total Structure Weight: 23237.00

Macromolecule Entities
Molecule Chains Length Organism Details
NADH OXIDASE A 205 Thermus thermophilus EC#: 1.6.99.3 IUBMB
Gene Name(s): nox TTHA0425
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
FMN N/A in BindingDB
Kd: 90 nM  BindingMOAD
Kd: 90 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.59 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.182
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.53 α = 90.00
b = 60.60 β = 90.00
c = 56.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-11-20
  • Released Date: 1997-03-12
  • Deposition author(s): Hecht, H.J., Erdmann, H., Park, H.J., Sprinzl, M., Schmid, R.D.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4