1NL7

Z. ramigera biosynthetic thiolase, acetylated enzyme complexed with CoA at pH 9.5

Structural Biology Knowledgebase: 1NL7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.179

Literature

Macromolecules
Sequence Display for 1NL7

Classification: TRANSFERASE

Total Structure Weight: 164253.58

Macromolecule Entities
Molecule Chains Length Organism Details
Acetyl-CoA acetyltransferase A, B, C, D 392 Zoogloea ramigera EC#: 2.3.1.9 IUBMB
Mutation: C89X, A129R
Gene Name(s): phbA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

A, B COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SCY
Query on SCY
A, B, C, D L-PEPTIDE LINKING C5 H9 N O3 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.179
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 84.37 α = 90.00
b = 79.06 β = 92.58
c = 148.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-06
  • Released Date: 2004-04-06
  • Deposition author(s): Kursula, P., Wierenga, R.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor