1NGX

Chimeric Germline Fab 7g12 with jeffamine fragment bound

Structural Biology Knowledgebase: 1NGX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 1NGX

Classification: IMMUNE SYSTEM

Total Structure Weight: 94084.07

Macromolecule Entities
Molecule Chains Length Organism Details
Germline Metal Chelatase Catalytic Antibody, Light chain A, L 213 Homo sapiens Mus musculus Fragment: germline Fab fragment
Germline Metal Chelatase Catalytic Antibody, Heavy chain B, H 216 Homo sapiens Mus musculus Fragment: germline Fab fragment

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
JEF
Query on JEF

B, H O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)
JEFFAMINE (Synonym)
C30 H63 N O10
ICCXIDTYQFYPNV-RUMGZKRTSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.225
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 70.67 α = 90.00
b = 64.72 β = 92.58
c = 93.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-18
  • Released Date: 2003-03-18
  • Deposition author(s): Yin, J., Andryski, S.E., Beuscher, A.B., Stevens, R.C., Schultz, P.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update