1NFR

Rv2002 gene product from Mycobacterium tuberculosis

Structural Biology Knowledgebase: 1NFR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 1NFR

Classification: oxidoreductase

Total Structure Weight: 111999.34

Macromolecule Entities
Molecule Chains Length Organism Details
Putative oxidoreductase Rv2002 A, B, C, D 260 Mycobacterium tuberculosis EC#: 1.1.1.53 IUBMB
Mutation: I6T, M19M, M27M, V47M, T69K, M127M, M190M
Gene Name(s): fabG3 Rv2002 MTCY39.16c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A, B, C, D NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.203
  • Space Group: I 4
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 120.02 α = 90.00
b = 120.02 β = 90.00
c = 140.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-16
  • Released Date: 2002-12-30
  • Deposition author(s): Yang, J.K., Park, M.S., Waldo, G.S., Suh, S.W., TB Structural Genomics Consortium (TBSGC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4