1NDH

CRYSTAL STRUCTURE OF NADH-CYTOCHROME B5 REDUCTASE FROM PIG LIVER AT 2.4 ANGSTROMS RESOLUTION

Structural Biology Knowledgebase: 1NDH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Observed: 0.223

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NDH

Classification: ELECTRON TRANSPORT (FLAVO PROTEIN)

Total Structure Weight: 31659.45

Macromolecule Entities
Molecule Chains Length Organism Details
CYTOCHROME B5 REDUCTASE A 272 Sus scrofa EC#: 1.6.2.2 IUBMB
Mutation: I24V, S25N, D137S, K212R, D260E
Gene Name(s): CYB5R3 Gene View DIA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Observed: 0.223
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 86.90 α = 90.00
b = 73.10 β = 90.00
c = 48.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1994-10-31
  • Released Date: 1995-02-14
  • Deposition author(s): Nishida, H., Miki, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4