1N94

Aryl Tetrahydropyridine Inhbitors of Farnesyltransferase: Glycine, Phenylalanine and Histidine Derivates

Structural Biology Knowledgebase: 1N94 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.295

Literature

Macromolecules
Sequence Display for 1N94

Classification: TRANSFERASE

Total Structure Weight: 83420.98

Macromolecule Entities
Molecule Chains Length Organism Details
Protein farnesyltransferase alpha subunit A 315 Rattus norvegicus EC#: 2.5.1.58 IUBMB 2.5.1.59 IUBMB
Fragment: residues 55-369
Gene Name(s): Fnta
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Protein farnesyltransferase beta subunit B 397 Rattus norvegicus EC#: 2.5.1.58 IUBMB
Fragment: residues 22-418
Gene Name(s): Fntb
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TIN
Query on TIN

A 2-{(5-{[BUTYL-(2-CYCLOHEXYL-ETHYL)-AMINO]- METHYL}-2'-METHYL-BIPHENYL-2-CARBONYL)-AMINO]- 4-METHYLSULFANYL-BUTYRIC ACID
C32 H46 N2 O3 S
GAQHYZNOMLXSEA-PMERELPUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HFP
Query on HFP

A ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID
C15 H33 O4 P
IJNCEETVCWDDQB-KFWWJZLASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TIN EC50: 16 nM (98) BindingDB

N/A in BindingMoad
IC50: 1.1 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.295
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 172.11 α = 90.00
b = 172.11 β = 90.00
c = 69.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-22
  • Released Date: 2003-01-07
  • Deposition author(s): Gwaltney II, S.L., O'Connor, S.J., Nelson, L.T., Sullivan, G.M., Imade, H., Wang, W., Hasvold, L., Li, Q., Cohen, J., Gu, W.Z.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4