1N8Q

LIPOXYGENASE IN COMPLEX WITH PROTOCATECHUIC ACID

Structural Biology Knowledgebase: 1N8Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 1N8Q

Classification: OXIDOREDUCTASE

Total Structure Weight: 97129.80

Macromolecule Entities
Molecule Chains Length Organism Details
lipoxygenase-3 A 857 Glycine max EC#: 1.13.11.58 IUBMB
Gene Name(s): LOX1.3 LOX3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Lipoxygenases

Protein Name: Lipoxygenase-L3 from soybeans


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DHB
Query on DHB

A 3,4-DIHYDROXYBENZOIC ACID
C7 H6 O4
YQUVCSBJEUQKSH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FE2
Query on FE2

A FE (II) ION
Fe
CWYNVVGOOAEACU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.189
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 112.64 α = 90.00
b = 136.96 β = 95.48
c = 61.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-21
  • Released Date: 2003-06-03
  • Deposition author(s): Borbulevych, O.Y., Jankun, J., Selman, S.H., Skrzypczak-Jankun, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor