1N8I

Biochemical and Structural Studies of Malate Synthase from Mycobacterium tuberculosis

Structural Biology Knowledgebase: 1N8I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.185

Literature

Macromolecules
Sequence Display for 1N8I

Classification: LYASE

Total Structure Weight: 80587.88

Macromolecule Entities
Molecule Chains Length Organism Details
Probable malate synthase G A 741 Mycobacterium tuberculosis EC#: 2.3.3.9 IUBMB
Gene Name(s): glcB MT1885
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GLV
Query on GLV

A GLYOXYLIC ACID
GLYOXALATE, GLYOXYLATE (Synonym)
C2 H2 O3
HHLFWLYXYJOTON-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.185
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 78.10 α = 90.00
b = 78.10 β = 90.00
c = 223.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-20
  • Released Date: 2002-12-18
  • Deposition author(s): Smith, C.V., Huang, C.C., Miczak, A., Russell, D.G., Sacchettini, J.C., Honer zu Bentrup, K., TB Structural Genomics Consortium (TBSGC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4