1N71

Crystal structure of aminoglycoside 6'-acetyltransferase type Ii in complex with coenzyme A

Structural Biology Knowledgebase: 1N71 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1N71

Classification: TRANSFERASE

Total Structure Weight: 85611.05

Macromolecule Entities
Molecule Chains Length Organism Details
aac(6')-Ii A, B, C, D 180 Enterococcus faecium Mutation: V127E
Gene Name(s): aac(6')-Ii
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

A, B, C, D COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.245
  • R-Value Work: 0.208
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 73.19 α = 90.00
b = 76.92 β = 90.00
c = 130.15 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-12
  • Released Date: 2003-03-18
  • Deposition author(s): Burk, D.L., Ghuman, N., Wybenga-Groot, L.E., Berghuis, A.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4