1N69

Crystal structure of human saposin B


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.222

Literature

Macromolecules
Sequence Display for 1N69

Classification: LIPID BINDING PROTEIN

Total Structure Weight: 28133.65

Macromolecule Entities
Molecule Chains Length Organism Details
SAPOSIN B A, B, C 81 Homo sapiens Gene Name(s): PSAP Gene View GLBA SAP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEH
Query on PEH

A DI-STEAROYL-3-SN-PHOSPHATIDYLETHANOLAMINE
C41 H82 N O8 P
LVNGJLRDBYCPGB-LDLOPFEMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.262
  • R-Value Work: 0.222
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 72.14 α = 90.00
b = 72.14 β = 90.00
c = 94.37 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-11-08
  • Released Date: 2003-01-07
  • Deposition author(s): Ahn, V.E., Faull, K.F., Whitelegge, J.P., Fluharty, A.L., Prive, G.G.

Revision History

  • Version 1_0: 2003-01-07

    Type: Initial release

  • Version 1_1: 2008-04-28

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-11

    Type: Refinement description