1N1P

ATOMIC RESOLUTION STRUCTURE OF CHOLESTEROL OXIDASE @ pH 7.4 (STREPTOMYCES SP. SA-COO)

Structural Biology Knowledgebase: 1N1P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.95 Å
  • R-Value Free: 0.119
  • R-Value Work: 0.097

Literature

Macromolecules
Sequence Display for 1N1P

Classification: OXIDOREDUCTASE

Total Structure Weight: 56012.78

Macromolecule Entities
Molecule Chains Length Organism Details
Cholesterol oxidase A 504 Streptomyces sp. EC#: 1.1.3.6 IUBMB
Details: FAD COFACTOR NON-COVALENTLY BOUND TO THE ENZYME
Gene Name(s): choA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.95 Å
  • R-Value Free: 0.119
  • R-Value Work: 0.097
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 51.27 α = 90.00
b = 72.96 β = 105.18
c = 63.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-10-18
  • Released Date: 2003-10-28
  • Deposition author(s): Vrielink, A., Lario, P.I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update