1N1C

Crystal Structure Of The Dimeric TorD Chaperone From Shewanella Massilia

Structural Biology Knowledgebase: 1N1C SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.224

Literature

Macromolecules
Sequence Display for 1N1C

Classification: CHAPERONE

Total Structure Weight: 49617.53

Macromolecule Entities
Molecule Chains Length Organism Details
TorA specific chaperone A, B 217 Shewanella massilia Mutation: H8P, M114M, M139M, M143M, F147C, F163V
Gene Name(s): torD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DTT
Query on DTT

A, B 2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL (Synonym)
C4 H10 O2 S2
VHJLVAABSRFDPM-IMJSIDKUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.224
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.96 α = 90.00
b = 93.44 β = 90.00
c = 95.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-10-17
  • Released Date: 2003-05-13
  • Deposition author(s): Tranier, S., Iobbi-Nivol, C., Mortier-Barriere, I., Birck, C., Mejean, V., Samama, J.-P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4