1MVE

Crystal structure of a natural circularly-permutated jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes

Structural Biology Knowledgebase: 1MVE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1MVE

Classification: HYDROLASE

Total Structure Weight: 27405.69

Macromolecule Entities
Molecule Chains Length Organism Details
Truncated 1,3-1,4-beta-D-glucanase A 243 Fibrobacter succinogenes EC#: 3.2.1.73 IUBMB
Fragment: Residues 1-243
Mutation: M27M, M29M, M39M, M223M
Gene Name(s): Fisuc_2961 FSU_0226
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.192
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 40.85 α = 90.00
b = 73.35 β = 90.00
c = 73.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-25
  • Released Date: 2003-07-15
  • Deposition author(s): Tsai, L.-C., Shyur, L.-F., Lee, S.-H., Lin, S.-S., Yuan, H.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4