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Actinomycin D binding to ATGCTGCAT
 
 
DOI:10.2210/pdb1mnv/pdb   NDB ID: DD0053
1MNV
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Antibiotic/dna
    Structure Weight: 7980.58
     
    Molecule:5'-D(*AP*TP*GP*CP*TP*GP*CP*AP*T)-3'
    Polymer:1Type:polydeoxyribonucleotideLength:9
    Chains:A, B
    Molecule:ACTINOMYCIN D
    Polymer:2Type:polypeptide(L)Length:11
    Chains:C, D
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    PXZ 2-AMINO-1,9-DICARBONYL-4,6-DIMETHYL-10-DEHYDRO-PHENOXAZIN-3-ONE(type: nonPolymer) C16 H12 N2 O4 3D Ligand Explorer Link out to Ligand Expos:PXZ Link out to SuperLigands:PXZ Link out to SuperHapten:PXZ 2D
    SAR SARCOSINE (parent: GLY)(type: glycine) C3 H7 N O2 3D Ligand Explorer Link out to Ligand Expos:SAR Link out to SuperLigands:SAR Link out to SuperHapten:SAR 2D
    MVA N-METHYLVALINE (parent: VAL)(type: lPeptideLinking) C6 H13 N O2 3D Ligand Explorer Link out to Ligand Expos:MVA Link out to SuperLigands:MVA Link out to SuperHapten:MVA 2D
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Hou, M.-H.,   Robinson, H.,   Gao, Y.-G.,   Wang, A.H.-J.

    Deposition:   2002-09-06
    Release:   2002-11-22
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 2.60
    R-Value: 0.233 (obs.)
    R-Free: 0.295
    Space Group: P 31 1 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 47.24 α = 90.00 
    b = 47.24 β = 90.00 
    c = 69.45 γ = 120.00