1MNN

Structure of the sporulation specific transcription factor Ndt80 bound to DNA

Structural Biology Knowledgebase: 1MNN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 1MNN

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 47723.18


Macromolecule Entities
Molecule Chains Length Organism Details
NDT80 protein A 340 Saccharomyces cerevisiae Fragment: DNA-BINDING DOMAIN (residues 1-340)
Mutation: D8V, S146G, I200T
Gene Name(s): NDT80 DAS1 YHR124W
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*TP*GP*CP*GP*AP*CP*AP*CP*AP*AP*AP*AP*AP*C)-3' B 14 synthetic
5'-D(*AP*GP*TP*TP*TP*TP*TP*GP*TP*GP*TP*CP*GP*C)-3' C 14 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.195
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 70.14 α = 90.00
b = 78.89 β = 90.00
c = 161.52 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-09-05
  • Released Date: 2002-11-20
  • Deposition author(s): Lamoureux, J.S., Stuart, D., Tsang, R., Wu, C., Glover, J.N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor