1MI5

The crystal structure of LC13 TcR in complex with HLAB8-EBV peptide complex

Structural Biology Knowledgebase: 1MI5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 1MI5

Classification: IMMUNE SYSTEM

Total Structure Weight: 94289.00

Macromolecule Entities
Molecule Chains Length Organism Details
MHC heavy chain A 277 Homo sapiens Fragment: extracellular domain
Gene Name(s): HLA-B Gene View HLAB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
beta 2 microglobulin B 99 Homo sapiens Gene Name(s): B2M Gene View CDABP0092 HDCMA22P
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Epstein Barr Virus peptide C 9 Human herpesvirus 4 Fragment: nonamer peptide
Gene Name(s): EBNA3 BLRF3-BERF1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TcR alpha chain D 201 Homo sapiens Fragment: extracellular domain
Gene Name(s): TRAC TCRA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TcR beta chain E 241 Homo sapiens Fragment: extracellular domain
Gene Name(s): TRBC1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.226
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.49 α = 90.00
b = 105.90 β = 90.00
c = 144.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-08-21
  • Released Date: 2003-02-04
  • Deposition author(s): Kjer-Nielsen, L., Clements, C.S., Purcell, A.W., Brooks, A.G., Whisstock, J.C., Burrows, S.R., McCluskey, J., Rossjohn, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4