1M9S

Crystal structure of Internalin B (InlB), a Listeria monocytogenes virulence protein containing SH3-like domains.

Structural Biology Knowledgebase: 1M9S SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.302
  • R-Value Work: 0.273

Literature

Macromolecules
Sequence Display for 1M9S

Classification: SIGNALING PROTEIN

Total Structure Weight: 69831.30

Macromolecule Entities
Molecule Chains Length Organism Details
Internalin B A 605 Listeria monocytogenes Mutation: P41S, S49P, A117T, V132I, A396T
Gene Name(s): inlB lmo0434
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TB
Query on TB

A TERBIUM(III) ION
Tb
HKCRVXUAKWXBLE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.302
  • R-Value Work: 0.273
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.50 α = 90.00
b = 330.90 β = 90.00
c = 182.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-07-29
  • Released Date: 2002-11-06
  • Deposition author(s): Marino, M., Banerjee, M., Jonquieres, R., Cossart, P., Ghosh, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4