1M75

Crystal Structure of the N208S Mutant of L-3-Hydroxyacyl-COA Dehydrogenase in Complex with NAD and Acetoacetyl-COA

Structural Biology Knowledgebase: 1M75 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.228

Literature

Macromolecules
Sequence Display for 1M75

Classification: OXIDOREDUCTASE

Total Structure Weight: 68713.98

Macromolecule Entities
Molecule Chains Length Organism Details
3-HYDROXYACYL-COA DEHYDROGENASE A, B 302 Homo sapiens EC#: 1.1.1.35 IUBMB
Fragment: SHORT CHAIN
Mutation: N208S
Gene Name(s): HADH Gene View HAD HADHSC SCHAD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CAA
Query on CAA

A, B ACETOACETYL-COENZYME A
C25 H40 N7 O18 P3 S
OJFDKHTZOUZBOS-CITAKDKDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAD
Query on NAD

A, B NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.228
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 50.15 α = 90.00
b = 87.60 β = 90.00
c = 158.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-07-18
  • Released Date: 2004-02-03
  • Deposition author(s): Barycki, J.J., Banaszak, L.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4