1M70

Crystal structure of oxidized recombinant cytochrome c4 from Pseudomonas stutzeri

Structural Biology Knowledgebase: 1M70 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 1M70

Classification: Electron Transport

Total Structure Weight: 83840.99

Macromolecule Entities
Molecule Chains Length Organism Details
Cytochrome c4 A, B, C, D 190 Pseudomonas stutzeri Gene Name(s): cc4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

A, B, C, D HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.155
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.96 α = 90.00
b = 57.64 β = 104.23
c = 84.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-07-18
  • Released Date: 2003-09-16
  • Deposition author(s): Noergaard, A., Harris, P., Larsen, S., Christensen, H.E.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update