Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography
DOI:10.2210/pdb1m06/pdb   NDB ID: PD0325
1M06
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Virus/dna  [ VIPERdb   ]
    Structure Weight: 73481.39
    Molecule: Capsid Protein
    Polymer: 1 Type: protein Length: 431
    Chains: F
    Organism: Enterobacteria phage alpha3
    Gene Name: F
    UniProtKB: Protein Feature View | Search PDB | P08767  
    Molecule: Major spike protein
    Polymer: 2 Type: protein Length: 187
    Chains: G
    Organism: Enterobacteria phage alpha3
    Gene Name: G
    UniProtKB: Protein Feature View | Search PDB | P31281  
    Molecule: Small core protein
    Polymer: 3 Type: protein Length: 24
    Chains: J
    Organism: Enterobacteria phage alpha3
    Gene Name: J
    UniProtKB: Protein Feature View | Search PDB | P69548  
    Molecule: 5'-D(P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR))-3'
    Polymer: 4 Type: dna Length: 10
    Chains: X
    Details: ssDNA FRAGMENT
    Organism: Enterobacteria phage alpha3
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Enterobacteria phage alpha3   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Enterobacteria phage alpha3   Taxonomy    
    Polymer: 3
    Scientific Name: Enterobacteria phage alpha3   Taxonomy    
    Polymer: 4
    Scientific Name: Enterobacteria phage alpha3   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1CD3   Procapsid of the bacteriophage phix174 
    1GFF   Atomic structure of the degraded procapsid particle of the bacteriophage G4. 
    1PHX   DNA packaging intermediates of the bacteriophage phix174 
    2BPA   Atomic structure of the single-stranded bacteriophage phix174 
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    3DR
    Search 
    3DR C5 H11 O6 P dnaLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PD0325
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
No info available for origin of biological assembly
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