1M06

Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography

Structural Biology Knowledgebase: 1M06 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.232

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1M06

Classification: Virus / DNA [ VIPERdb ]

Total Structure Weight: 73481.36


Macromolecule Entities
Molecule Chains Length Organism Details
Capsid Protein F 431 Enterobacteria phage alpha3 Mutation: R160G
Gene Name(s): F
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Major spike protein G 187 Enterobacteria phage alpha3 Gene Name(s): G
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Small core protein J 24 Enterobacteria phage alpha3 Gene Name(s): J
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR))-3' X 10 Enterobacteria phage alpha3 ssDNA FRAGMENT

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
3DR
Query on 3DR
X DNA LINKING C5 H11 O6 P --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.232
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 290.26 α = 90.00
b = 332.11 β = 94.08
c = 337.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-06-12
  • Released Date: 2002-12-25
  • Deposition author(s): Bernal, R.A., Hafenstein, S., Olson, N.H., Bowman, V., Chipman, P.R., Baker, T.S., Fane, B.A., Rossmann, M.G.

Revision History

  • 2011-12-28
    Type: Advisory | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4