1LYL

LYSYL-TRNA SYNTHETASE (LYSU) (E.C.6.1.1.6) COMPLEXED WITH LYSINE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 1LYL

Classification: LIGASE (SYNTHETASE)

Total Structure Weight: 173745.11

Macromolecule Entities
Molecule Chains Length Organism Details
LYSYL-TRNA SYNTHETASE (LYSU) A, B, C 504 Escherichia coli EC#: 6.1.1.6 IUBMB
Gene Name(s): lysU b4129 JW4090
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
LYS
Query on LYS

A, B, C LYSINE
C6 H15 N2 O2
KDXKERNSBIXSRK-YFKPBYRVSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.193
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 144.27 α = 90.00
b = 257.80 β = 90.00
c = 182.08 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-05-03
  • Released Date: 1995-10-15
  • Deposition author(s): Onesti, S., Brick, P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4