1LSZ

CRYSTAL STRUCTURE OF THE MUTANT D52S HEN EGG WHITE LYSOZYME WITH AN OLIGOSACCHARIDE PRODUCT

Structural Biology Knowledgebase: 1LSZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed: 0.160

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1LSZ

Classification: HYDROLASE(O-GLYCOSYL)

Total Structure Weight: 17060.53

Macromolecule Entities
Molecule Chains Length Organism Details
HEN EGG WHITE LYSOZYME A 147 Gallus gallus EC#: 3.2.1.17 IUBMB
Mutation: D52S
Gene Name(s): LYZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

A 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed: 0.160
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 79.30 α = 90.00
b = 79.30 β = 90.00
c = 37.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1994-09-27
  • Released Date: 1995-01-26
  • Deposition author(s): Johnson, L.N., Hadfield, A.T.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4