1LQS

CRYSTAL STRUCTURE OF HUMAN CYTOMEGALOVIRUS IL-10 BOUND TO SOLUBLE HUMAN IL-10R1

Structural Biology Knowledgebase: 1LQS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.244

Literature

Macromolecules
Sequence Display for 1LQS

Classification: IMMUNE SYSTEM

Total Structure Weight: 85739.48

Macromolecule Entities
Molecule Chains Length Organism Details
INTERLEUKIN-10 RECEPTOR ALPHA CHAIN R, S 214 Homo sapiens Fragment: EXTRACELLULAR DOMAIN, RESIDUES 22-235
Mutation: N29Q, N53Q, N89Q, N133Q, N156Q, N168Q
Gene Name(s): IL10RA Gene View IL10R
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
INTERLEUKIN-10-LIKE PROTEIN L, M 157 Human herpesvirus 5 Fragment: RESIDUES 20-176
Gene Name(s): UL111A
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

L, M N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.244
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 114.29 α = 90.00
b = 104.68 β = 106.49
c = 91.89 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-05-13
  • Released Date: 2002-07-17
  • Deposition author(s): Jones, B.C., Logsdon, N.J., Josephson, K., Cook, J., Barry, P.A., Walter, M.R.

Revision History

  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4