1L9C

Role of Histidine 269 in Catalysis by Monomeric Sarcosine Oxidase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 1L9C

Classification: OXIDOREDUCTASE

Total Structure Weight: 87892.53

Macromolecule Entities
Molecule Chains Length Organism Details
Monomeric Sarcosine Oxidase A, B 389 Bacillus sp. b-0618 EC#: 1.5.3.1 IUBMB
Mutation: H269N
Gene Name(s): soxA sox
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.171
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 72.71 α = 90.00
b = 69.25 β = 94.25
c = 73.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-22
  • Released Date: 2002-08-30
  • Deposition author(s): Zhao, G., Song, H., Chen, Z.-w., Mathews, F.S., Jorns, M.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name