1L3F

Thermolysin in the Absence of Substrate has an Open Conformation

Structural Biology Knowledgebase: 1L3F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.302
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 1L3F

Classification: HYDROLASE

Total Structure Weight: 34719.07

Macromolecule Entities
Molecule Chains Length Organism Details
Thermolysin E 316 Bacillus thermoproteolyticus EC#: 3.4.24.27 IUBMB
Gene Name(s): npr
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

E ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

E CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.302
  • R-Value Work: 0.202
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 97.05 α = 90.00
b = 97.05 β = 90.00
c = 106.58 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-26
  • Released Date: 2002-07-03
  • Deposition author(s): Hausrath, A.C., Matthews, B.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4