1KGD

Crystal Structure of the Guanylate Kinase-like Domain of Human CASK

Structural Biology Knowledgebase: 1KGD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.31 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.186

Literature

Macromolecules
Sequence Display for 1KGD

Classification: PROTEIN BINDING

Total Structure Weight: 20984.84

Macromolecule Entities
Molecule Chains Length Organism Details
PERIPHERAL PLASMA MEMBRANE CASK A 180 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: guanylate kinase like domain
Mutation: R775K
Gene Name(s): CASK Gene View LIN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMT
Query on FMT

A FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.31 Å
  • R-Value Free: 0.212
  • R-Value Work: 0.186
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 70.34 α = 90.00
b = 70.34 β = 90.00
c = 74.86 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-11-26
  • Released Date: 2001-12-19
  • Deposition author(s): Li, Y., Spangenberg, O., Paarmann, I., Konrad, M., Lavie, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4